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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105909846Prepro-urotensin II-beta-like. (124 aa)    
Predicted Functional Partners:
ENSCHAP00000002285
Endothelin 1.
     
 0.681
ENSCHAP00000004177
Endothelin 1.
     
 0.681
ENSCHAP00000055455
annotation not available
   
 
 0.677
LOC105910072
Pro-thyrotropin-releasing hormone-A-like.
     
 0.671
EDN2
Endothelin 2.
     
 0.669
ENSCHAP00000023576
Neuromedin U.
     
 0.622
ENSCHAP00000047713
Endothelin 3b.
     
 0.594
ENSCHAP00000060512
annotation not available
     
 0.594
ENSCHAP00000033435
Prokineticin 1.
     
 0.582
ENSCHAP00000056727
Prokineticin 2.
     
 0.582
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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