Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011858annotation not available (138 aa)    
Predicted Functional Partners:
fabp1
Fatty acid binding protein 1.
  
  
 
0.901
ENSCHAP00000011990
annotation not available
  
  
 
0.900
APOH
Apolipoprotein H.
   
  
 0.772
ENSCHAP00000047889
annotation not available
   
  
 0.772
ENSCHAP00000057954
annotation not available
   
  
 0.771
ENSCHAP00000057957
annotation not available
   
  
 0.771
gc
GC vitamin D binding protein.
   
  
 0.723
LOC105903118
Fatty acid-binding protein, intestinal-like.
   
 
 0.675
ENSCHAP00000032703
annotation not available
   
 
 0.672
ENSCHAP00000049395
annotation not available
   
 
 0.672
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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