Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105912802Uncharacterized LOC105912802. (408 aa)    
Predicted Functional Partners:
LOC105906309
Ras-related GTP-binding protein A.
    
 0.886
JAK1
Tyrosine-protein kinase JAK1-like.
    
 0.775
jak3
Janus kinase 3.
    
 0.775
ENSCHAP00000022453
Janus kinase 2a.
    
 0.775
ENSCHAP00000032182
Tyrosine kinase 2.
    
 0.775
ENSCHAP00000008286
annotation not available
     
 0.626
ENSCHAP00000028273
Signal transducer and activator of transcription 5b.
     
 0.626
ENSCHAP00000053040
Signal transducer and activator of transcription 6, interleukin-4 induced.
     
 0.626
ENSCHAP00000032504
Suppressor of cytokine signaling 5b.
     
  0.575
ENSCHAP00000049636
Suppressor of cytokine signaling 5a.
     
  0.575
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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