STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011965annotation not available (395 aa)    
Predicted Functional Partners:
ENSCHAP00000003882
annotation not available
   
 0.891
ENSCHAP00000011511
SET domain bifurcated histone lysine methyltransferase 1b.
   
 0.891
ENSCHAP00000030138
SET domain bifurcated histone lysine methyltransferase 1a.
   
 0.891
arl14ep
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.834
ENSCHAP00000010783
annotation not available
    
 0.594
ENSCHAP00000018131
Small ubiquitin like modifier 2b.
    
 0.594
LOC105901964
Small ubiquitin-related modifier 2-like.
    
 0.594
ENSCHAP00000051067
Small ubiquitin like modifier 3a.
    
 0.594
ENSCHAP00000001851
annotation not available
   
  0.593
KCTD15
Potassium channel tetramerization domain containing 15.
 
    
 0.576
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.