STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000012439Zgc:101810. (395 aa)    
Predicted Functional Partners:
ENSCHAP00000040099
Actin related protein 2/3 complex, subunit 4.
   
 0.998
arpc2
Actin related protein 2/3 complex subunit 2.
   
 0.997
LOC105900701
Actin-related protein 3.
  
0.997
actr3b
Actin related protein 3B.
  
0.996
ENSCHAP00000031536
annotation not available
    
 0.986
ENSCHAP00000054427
WASP actin nucleation promoting factor b.
    
 0.985
ENSCHAP00000016490
Intersectin 2b.
   
 
 0.984
ARPC5L
Actin related protein 2/3 complex subunit 5 like.
   
 0.984
ENSCHAP00000034626
Actin related protein 2/3 complex, subunit 5B.
   
 0.984
ENSCHAP00000057857
Intersectin 2a.
   
 
 0.984
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.