STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000012633Protein kinase cGMP-dependent 1b. (704 aa)    
Predicted Functional Partners:
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2.
   
 0.847
ENSCHAP00000042083
Guanylate cyclase 1 soluble subunit alpha 1.
   
 0.847
gucy1b1
Guanylate cyclase 1 soluble subunit beta 1.
   
 0.846
ENSCHAP00000057183
Guanylate cyclase 1, soluble, beta 2.
   
 0.844
ENSCHAP00000011360
Murine retrovirus integration site 1 homolog.
   
 0.827
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.805
ENSCHAP00000006598
Protein phosphatase 1, regulatory subunit 12C.
   
 0.794
LOC105902522
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
    
 0.791
ENSCHAP00000028374
annotation not available
    
 0.791
ENSCHAP00000058557
Protein phosphatase 1, regulatory subunit 12A.
   
 0.788
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.