STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rwdd1RWD domain containing 1. (241 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.994
drg1
Developmentally regulated GTP binding protein 1.
   
 
 0.974
gcn1
GCN1 activator of EIF2AK4.
    
 
 0.916
ENSCHAP00000049852
Density-regulated protein.
   
    0.884
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.835
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.822
bccip
BRCA2 and CDKN1A interacting protein.
   
    0.714
ENSCHAP00000025982
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
   0.668
ENSCHAP00000030960
RNA polymerase I and III subunit D.
   
    0.625
ENSCHAP00000000637
annotation not available
    
 
 0.613
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.