STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000012854annotation not available (382 aa)    
Predicted Functional Partners:
ENSCHAP00000012809
annotation not available
 
     0.915
ENSCHAP00000056258
annotation not available
     
 0.731
bmp8a
Bone morphogenetic protein 8a.
    
  0.659
ENSCHAP00000029150
Centrosomal protein 72.
   
    0.637
ENSCHAP00000044551
annotation not available
   
    0.637
ttll9
Tubulin tyrosine ligase like 9.
   
    0.637
bmp5
Bone morphogenetic protein 5.
    
  0.548
ENSCHAP00000050492
Bone morphogenetic protein 7b.
    
  0.548
bmp6
Bone morphogenetic protein 6.
    
  0.548
LOC105909473
Protein DVR-1-like.
    
  0.500
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.