STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105908576Noggin-2-like. (218 aa)    
Predicted Functional Partners:
ENSCHAP00000055557
Bone morphogenetic protein 4.
    
 0.942
LOC105910662
Bone morphogenetic protein 2-like.
    
 0.928
ENSCHAP00000050492
Bone morphogenetic protein 7b.
    
 0.925
LOC105909473
Protein DVR-1-like.
    
 0.911
ENSCHAP00000024460
Growth differentiation factor 5.
    
 0.905
ENSCHAP00000021249
Bone morphogenetic protein 16.
    
 0.903
bmp5
Bone morphogenetic protein 5.
    
 0.901
bmp6
Bone morphogenetic protein 6.
    
 0.899
ENSCHAP00000050961
Growth differentiation factor 7.
    
 0.897
ENSCHAP00000005655
annotation not available
    
 0.896
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.