STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000013134Neutrophil cytosolic factor 4. (347 aa)    
Predicted Functional Partners:
ENSCHAP00000019934
Neutrophil cytosolic factor 1.
   
0.998
ENSCHAP00000049809
Neutrophil cytosolic factor 2.
   
0.996
ENSCHAP00000035585
NADPH oxidase activator 1.
   
 0.995
LOC105906520
Cytochrome b-245 light chain.
   
 0.972
ENSCHAP00000028236
annotation not available
   
 0.965
ENSCHAP00000047148
annotation not available
   
 0.942
LOC105892187
Ras-related C3 botulinum toxin substrate 2.
   
 0.933
ENSCHAP00000004620
Dual oxidase.
   
 0.913
ENSCHAP00000041997
NADPH oxidase, EF-hand calcium binding domain 5.
   
 0.912
LOC105899959
Ras-related C3 botulinum toxin substrate 3.
   
 0.909
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.