STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pvalbParvalbumin. (127 aa)    
Predicted Functional Partners:
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
    
 0.808
ENSCHAP00000026217
Myosin IIIA.
   
 0.755
ENSCHAP00000026726
annotation not available
   
 0.755
ENSCHAP00000032432
annotation not available
   
 0.755
ENSCHAP00000054831
Myosin IIIB.
   
 0.755
ENSCHAP00000009160
RAN binding protein 2.
  
 0.718
ENSCHAP00000027391
WD repeat domain 90.
   
 
 0.687
ENSCHAP00000002403
Xeroderma pigmentosum, complementation group C.
    
 0.654
ENSCHAP00000036655
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.643
ENSCHAP00000008383
Myosin IXB.
    
 0.629
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.