STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000013316annotation not available (996 aa)    
Predicted Functional Partners:
nek7
NIMA related kinase 7.
    
 0.590
ENSCHAP00000024796
BRCA1/BRCA2-containing complex, subunit 3.
    
  0.548
ENSCHAP00000017711
annotation not available
   
 0.521
ENSCHAP00000002282
Regulatory factor X, 5.
    
 0.501
rps27a
Ribosomal protein S27a.
    
  0.500
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.493
ENSCHAP00000027369
annotation not available
     
 0.490
ENSCHAP00000009160
RAN binding protein 2.
   
 
  0.489
LOC105901470
Thioredoxin-interacting protein-like.
     
 0.487
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
  0.484
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.