STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000013388annotation not available (439 aa)    
Predicted Functional Partners:
LOC105895092
Non-specific lipid-transfer protein-like.
   
 
 0.875
ENSCHAP00000051341
Sterol carrier protein 2a.
   
 
 0.875
acot8
acyl-CoA thioesterase 8.
     
 0.717
acot7
acyl-CoA thioesterase 7.
  
 
 0.694
ENSCHAP00000030843
acyl-CoA thioesterase 19.
  
  
 
0.673
ENSCHAP00000050751
acyl-CoA thioesterase 16.
  
  
 
0.673
LOC105901670
Acyl-coenzyme A thioesterase THEM4-like.
     
 0.658
ENSCHAP00000014333
Dynein, axonemal, light chain 1.
 
   
  0.651
gad2
Glutamate decarboxylase 2.
   
 
  0.637
ENSCHAP00000039329
annotation not available
  
 
 
0.636
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.