STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000014366BCL6A transcription repressor b. (562 aa)    
Predicted Functional Partners:
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.887
ENSCHAP00000031150
Nuclear receptor corepressor 1.
    
 0.864
ENSCHAP00000006956
annotation not available
    
  0.852
ENSCHAP00000019955
BCL6 corepressor-like 1.
    
 0.835
ENSCHAP00000051413
BCL6 corepressor.
    
 0.835
ENSCHAP00000039408
Tumor protein p53.
   
 0.604
ppil6
Peptidylprolyl isomerase like 6.
    
  0.599
gart
annotation not available
     
 0.599
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.596
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.554
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.