STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tectbTectorin beta. (335 aa)    
Predicted Functional Partners:
ENSCHAP00000008511
Otogelin.
      
 0.539
ENSCHAP00000051044
BRICHOS domain containing 5.
      
 0.538
lgmn
Legumain.
      
 0.531
ENSCHAP00000010515
Zinc finger DHHC-type containing 6.
      
 0.525
ENSCHAP00000033421
Tetratricopeptide repeat domain 8.
      
 0.524
ENSCHAP00000057985
NHL repeat containing 2.
      
 0.515
ENSCHAP00000058172
Si:ch211-225b10.4.
      
 0.515
ENSCHAP00000041655
annotation not available
      
 0.473
cib2
Calcium and integrin binding family member 2.
      
 0.445
ENSCHAP00000010311
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.444
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.