STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000014497annotation not available (382 aa)    
Predicted Functional Partners:
ENSCHAP00000050446
annotation not available
   
0.995
myd88
MYD88 innate immune signal transduction adaptor.
    
 0.941
ENSCHAP00000029371
Interleukin 1, beta.
   
 0.836
ENSCHAP00000029412
Interleukin 1, beta.
   
 0.836
ENSCHAP00000029481
Interleukin 1, beta.
   
 0.836
ENSCHAP00000029519
annotation not available
   
 0.836
ENSCHAP00000040398
Interleukin-1 receptor-associated kinase 4.
    
 0.786
ENSCHAP00000033351
TNF receptor-associated factor 6.
   
 0.746
TRAF6
TNF receptor-associated factor 6-like.
   
 0.746
ENSCHAP00000003426
annotation not available
   
 
0.694
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.