STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a21Solute carrier family 25 member 21. (301 aa)    
Predicted Functional Partners:
tbx20
T-box transcription factor 20.
    
   0.790
mipol1
Mirror-image polydactyly 1.
   
  
 0.579
ENSCHAP00000008770
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.530
ENSCHAP00000014774
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.530
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.485
ctu1
Cytosolic thiouridylase subunit 1.
 
      0.470
ENSCHAP00000033748
Zinc finger, CCHC domain containing 14.
    
 
 0.461
ENSCHAP00000020597
Deoxyribonuclease I-like 1.
    
   0.456
LOC105906409
Deoxyribonuclease gamma-like.
    
   0.456
DNASE1L3
Deoxyribonuclease 1 like 3.
    
   0.456
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.