STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pard6gPar-6 family cell polarity regulator gamma. (426 aa)    
Predicted Functional Partners:
ENSCHAP00000041859
annotation not available
    
 0.975
ENSCHAP00000001644
annotation not available
    
 0.971
prkci
Protein kinase C iota.
    
 0.971
ENSCHAP00000018026
annotation not available
    
 0.929
LOC105906845
Cell division control protein 42 homolog.
    
 0.929
ENSCHAP00000025941
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.897
ENSCHAP00000041671
annotation not available
    
 0.897
ENSCHAP00000051208
annotation not available
    
 0.897
LLGL1
LLGL scribble cell polarity complex component 1.
    
 
 0.893
ENSCHAP00000003808
annotation not available
    
 0.880
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.