STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105899433NAD-dependent protein deacylase sirtuin-5, mitochondrial-like. (308 aa)    
Predicted Functional Partners:
ENSCHAP00000011503
Lysine (K)-specific demethylase 2Ab.
    
 0.957
ENSCHAP00000020096
Lysine (K)-specific demethylase 2Ba.
    
 0.957
ENSCHAP00000021011
Zgc:158376.
    
 0.957
ENSCHAP00000046845
Lysine (K)-specific demethylase 2Bb.
    
 0.957
ENSCHAP00000057236
Lysine (K)-specific demethylase 2Aa.
    
 0.957
ENSCHAP00000011532
Sirtuin 6.
  
0.937
ENSCHAP00000010292
Sirtuin 7.
  
 0.930
ENSCHAP00000013737
Sirtuin 4.
  
 
0.909
ENSCHAP00000024514
WRN RecQ like helicase.
  
 
 0.900
nadk
NAD kinase.
  
 
 0.900
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.