STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015181Dystrobrevin, beta b. (637 aa)    
Predicted Functional Partners:
rsph3
Radial spoke head 3.
    
   0.889
ENSCHAP00000048431
Protein phosphatase 1, regulatory subunit 21.
    
   0.889
ENSCHAP00000025115
Si:dkey-34e4.1.
     
 0.882
ENSCHAP00000036561
Nitric oxide synthase 1 (neuronal) adaptor protein b.
     
 0.882
ENSCHAP00000056747
Nitric oxide synthase 1 (neuronal) adaptor protein a.
     
 0.882
sntb2
Syntrophin beta 2.
    
 0.874
sntb1
Syntrophin beta 1.
    
 0.874
SNTA1
Syntrophin alpha 1.
    
 0.874
ENSCHAP00000018538
Dystroglycan 1.
    
 0.868
ENSCHAP00000004807
Syntrophin, gamma 2.
    
 0.844
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.