STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015259annotation not available (367 aa)    
Predicted Functional Partners:
ENSCHAP00000011363
annotation not available
    
 0.760
LOC105905810
Neuropeptide B-like.
    
 0.760
ENSCHAP00000005677
Prepronociceptin a.
    
 0.746
sst
Somatostatin.
    
 0.707
gal
Galanin and GMAP prepropeptide.
    
 0.701
ENSCHAP00000023576
Neuromedin U.
    
  0.666
ENSCHAP00000003704
Proopiomelanocortin a.
   
 0.661
ENSCHAP00000003716
Proopiomelanocortin a.
   
 0.661
ENSCHAP00000019040
Proopiomelanocortin b.
   
 0.661
agt
Angiotensinogen.
    
  0.648
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.