STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015284annotation not available (182 aa)    
Predicted Functional Partners:
ENSCHAP00000033072
annotation not available
   
 0.993
ENSCHAP00000038682
Si:ch211-195p4.4.
   
 
 0.923
cenpk
Centromere protein K.
   
 
 0.908
ENSCHAP00000009576
Cell division cycle associated 8.
   
 
 0.884
ENSCHAP00000011383
annotation not available
   
 0.877
LOC105893332
Histone-binding protein RBBP7.
   
 0.877
ENSCHAP00000018034
Centromere protein I.
   
 
 0.862
ENSCHAP00000046742
annotation not available
   
 
 0.861
ENSCHAP00000037787
Centromere protein N.
   
 
 0.847
ENSCHAP00000002342
PDZ binding kinase.
   
    0.835
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.