STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnrh2Gonadotropin releasing hormone 2. (86 aa)    
Predicted Functional Partners:
ENSCHAP00000026704
Mitochondrial ribosomal protein S22.
   
 0.993
mrps9
Mitochondrial ribosomal protein S9.
    
 0.991
mrps16
Mitochondrial ribosomal protein S16.
   
  0.989
mrps25
Mitochondrial ribosomal protein S25.
   
  0.989
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.989
ENSCHAP00000006197
Mitochondrial ribosomal protein S31.
   
  0.988
mrps35
Mitochondrial ribosomal protein S35.
   
  0.988
ENSCHAP00000046893
Mitochondrial ribosomal protein S17.
   
  0.988
dap3
Death associated protein 3.
   
  0.987
ENSCHAP00000035402
Mitochondrial ribosomal protein S6.
    
  0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.