STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015417Si:dkey-177p2.6. (274 aa)    
Predicted Functional Partners:
ENSCHAP00000048322
X-linked inhibitor of apoptosis.
    
   0.495
ENSCHAP00000055835
Cysteine-serine-rich nuclear protein 1a.
   
    0.457
ENSCHAP00000044121
SERTA domain containing 4.
      
 0.445
ENSCHAP00000062650
Cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4).
    
 
 0.427
SERTAD2
SERTA domain containing 2.
  
   
0.415
ENSCHAP00000025115
Si:dkey-34e4.1.
      
 0.410
ENSCHAP00000036561
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.410
ENSCHAP00000056747
Nitric oxide synthase 1 (neuronal) adaptor protein a.
      
 0.410
LOC105897212
Cell division cycle-associated protein 4-like.
      
0.408
ENSCHAP00000015487
Cell division cycle associated 4.
      
0.408
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.