STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015487Cell division cycle associated 4. (258 aa)    
Predicted Functional Partners:
ENSCHAP00000029157
Protein phosphatase 2, regulatory subunit B, delta.
    
   0.591
LOC105903502
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like.
    
   0.568
ENSCHAP00000044121
SERTA domain containing 4.
      
 0.520
LOC105895368
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
   0.480
LOC105903801
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
   0.480
LOC105902388
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
   0.471
ENSCHAP00000039264
annotation not available
    
   0.471
LOC105890557
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
   0.471
ENSCHAP00000025115
Si:dkey-34e4.1.
      
 0.410
ENSCHAP00000036561
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.410
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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