STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105906821Choline/ethanolaminephosphotransferase 1-like. (424 aa)    
Predicted Functional Partners:
pemt
Phosphatidylethanolamine N-methyltransferase.
    
 0.928
ENSCHAP00000019851
Membrane bound O-acyltransferase domain containing 1.
   
 
 0.902
ptdss2
Phosphatidylserine synthase 2.
 
 
 
 0.895
ENSCHAP00000005971
Lysophosphatidylcholine acyltransferase 2.
     
 0.890
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha.
     
 0.882
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta.
     
 0.882
ENSCHAP00000059373
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.882
ENSCHAP00000012489
Lysophosphatidylcholine acyltransferase 3.
   
 
 0.878
ENSCHAP00000022398
Membrane bound O-acyltransferase domain containing 2a.
     
 0.878
LOC105894439
Membrane-bound O-acyltransferase domain-containing protein 2-like.
     
 0.878
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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