STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015809annotation not available (67 aa)    
Predicted Functional Partners:
ENSCHAP00000026988
glutamyl-prolyl-tRNA synthetase 1.
  
 0.999
eef1b2
Eukaryotic translation elongation factor 1 beta 2.
   
 0.914
eef1d
Eukaryotic translation elongation factor 1 delta.
   
 0.914
ENSCHAP00000029605
lysyl-tRNA synthetase 1.
   
 0.903
ENSCHAP00000021694
annotation not available
  
 
 0.886
gpx7
Glutathione peroxidase 7.
  
 
 0.886
gsto1
Glutathione S-transferase omega 1.
   
 0.885
ENSCHAP00000004516
annotation not available
    
 0.879
GSTP1
Glutathione S-transferase pi 1.
    
 0.879
LOC105911621
Glutathione S-transferase 3-like.
    
 0.870
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.