STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105905609Uncharacterized LOC105905609. (705 aa)    
Predicted Functional Partners:
ENSCHAP00000003924
Tumor protein p63.
    
 0.801
ENSCHAP00000039357
Tumor protein p53.
    
 0.801
ENSCHAP00000039408
Tumor protein p53.
    
 0.801
ENSCHAP00000042143
annotation not available
    
 0.801
ENSCHAP00000048664
Tumor protein p73.
    
 0.801
ENSCHAP00000030518
Polymerase (DNA directed), eta.
    
 0.794
poli
DNA polymerase iota.
    
 0.794
rps27a
Ribosomal protein S27a.
    
 0.792
ENSCHAP00000020055
REV1 DNA directed polymerase.
    
 0.757
rfc3
Replication factor C subunit 3.
   
 
  0.665
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.