STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015936annotation not available (444 aa)    
Predicted Functional Partners:
LOC105909040
Chromosome unknown open reading frame, human C1orf109.
   
    0.786
ENSCHAP00000026295
Zgc:193812.
   
    0.694
LIX1L
Limb and CNS expressed 1 like.
   
    0.617
ENSCHAP00000045309
Limb and CNS expressed 1.
   
    0.617
ENSCHAP00000011231
N-acetylglucosamine kinase.
   
  
 0.565
ENSCHAP00000011310
Meiosis 1 associated protein.
   
  
 0.565
ENSCHAP00000050616
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.556
ENSCHAP00000000567
annotation not available
   
    0.553
ENSCHAP00000012593
Calcium homeostasis modulator family member 6.
   
    0.553
LOC105897606
Protein FAM26F-like.
   
    0.553
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.