STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000015943Dual specificity phosphatase 22b. (181 aa)    
Predicted Functional Partners:
pdlim4
PDZ and LIM domain 4.
    
 0.847
LOC105892187
Ras-related C3 botulinum toxin substrate 2.
    
  0.706
LOC105899959
Ras-related C3 botulinum toxin substrate 3.
    
  0.706
rac3
Rac family small GTPase 3.
    
  0.706
ENSCHAP00000016419
annotation not available
    
  0.703
ENSCHAP00000038400
Myosin XVIIIAa.
    
  0.703
ENSCHAP00000058650
Myosin XVIIIAb.
    
  0.703
ENSCHAP00000039433
Inositol polyphosphate phosphatase-like 1b.
   
 
 0.599
ENSCHAP00000025941
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
  0.597
ENSCHAP00000041671
annotation not available
    
  0.597
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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