STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000016266annotation not available (113 aa)    
Predicted Functional Partners:
ENSCHAP00000014494
annotation not available
   
 0.577
ENSCHAP00000005866
CD79a molecule, immunoglobulin-associated alpha.
   
 0.566
ENSCHAP00000031766
annotation not available
  
 
  0.563
ENSCHAP00000006303
annotation not available
  
 
  0.553
ENSCHAP00000047994
annotation not available
  
 
  0.552
ENSCHAP00000005931
annotation not available
  
 
  0.543
ENSCHAP00000000831
Immunoglobulin heavy variable 2-3.
  
 
  0.542
ENSCHAP00000031518
annotation not available
  
 
  0.531
ENSCHAP00000053143
Tissue factor pathway inhibitor a.
    
  0.530
ENSCHAP00000006065
annotation not available
  
 
  0.524
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.