STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000016521Ankyrin repeat domain 33ba. (519 aa)    
Predicted Functional Partners:
aprt
Adenine phosphoribosyltransferase.
  
 
 0.761
ENSCHAP00000008881
Angiomotin.
    
 0.735
ppil6
Peptidylprolyl isomerase like 6.
   
 0.705
ephx2
Epoxide hydrolase 2.
    
  0.691
gmps
Guanine monophosphate synthase.
  
 
 0.685
pard6g
Par-6 family cell polarity regulator gamma.
    
 0.679
pard6a
Par-6 family cell polarity regulator alpha.
    
 0.679
LOC105910269
Partitioning defective 6 homolog gamma-like.
    
 0.679
ENSCHAP00000042438
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.679
ENSCHAP00000003188
Adenylate kinase 5, like.
   
 0.671
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.