STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891873Uncharacterized LOC105891873. (238 aa)    
Predicted Functional Partners:
mtrex
Mtr4 exosome RNA helicase.
   
 0.811
tent4a
Terminal nucleotidyltransferase 4A.
   
 0.698
ENSCHAP00000028382
Terminal nucleotidyltransferase 4B.
   
 0.698
ENSCHAP00000026783
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 0.539
ENSCHAP00000021984
Importin 7.
   
 0.499
ENSCHAP00000046329
Importin 8.
   
 0.499
gcn1
GCN1 activator of EIF2AK4.
    
  0.462
ENSCHAP00000051880
EBNA1 binding protein 2.
   
   0.447
ENSCHAP00000029824
Pleckstrin and Sec7 domain containing 3, like.
      
 0.445
ENSCHAP00000057247
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
   0.428
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.