STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000016617Si:ch211-220i18.4. (418 aa)    
Predicted Functional Partners:
srsf1
Serine and arginine rich splicing factor 1.
    
 0.815
cdc5l
Cell division cycle 5 like.
    
   0.807
srsf9
Serine and arginine rich splicing factor 9.
    
 0.802
ENSCHAP00000046927
Serine and arginine rich splicing factor 6a.
   
 0.783
ENSCHAP00000060579
annotation not available
   
 0.783
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.783
srsf5
Serine and arginine rich splicing factor 5.
   
 0.779
ENSCHAP00000013566
Serine and arginine rich splicing factor 5b.
   
 0.779
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.779
ENSCHAP00000020268
annotation not available
   
 0.779
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.