STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000016963Membrane protein, palmitoylated 4-like. (568 aa)    
Predicted Functional Partners:
ENSCHAP00000024343
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5).
  
 
0.779
LOC105909465
MAGUK p55 subfamily member 5-A-like.
  
 
0.773
aprt
Adenine phosphoribosyltransferase.
  
 
 0.761
ppil6
Peptidylprolyl isomerase like 6.
   
 0.705
ephx2
Epoxide hydrolase 2.
    
  0.691
gmps
Guanine monophosphate synthase.
  
 
 0.685
ENSCHAP00000003188
Adenylate kinase 5, like.
   
 0.671
ak1
Adenylate kinase 1.
   
 0.671
ENSCHAP00000011057
Adenylate kinase 4.
   
 0.671
CMPK1
Cytidine/uridine monophosphate kinase 1.
   
 0.671
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.