STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnttip2Deoxynucleotidyltransferase terminal interacting protein 2. (1070 aa)    
Predicted Functional Partners:
ENSCHAP00000026317
UTP3 small subunit processome component.
   
 
 0.997
utp11
UTP11 small subunit processome component.
   
 
 0.997
ENSCHAP00000041417
Apoptosis antagonizing transcription factor.
   
 
 0.997
mphosph10
M-phase phosphoprotein 10.
   
 
 0.996
wdr46
WD repeat domain 46.
   
 
 0.996
bms1
BMS1 ribosome biogenesis factor.
   
 
 0.996
ENSCHAP00000043355
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.995
ENSCHAP00000050145
WD repeat domain 43.
   
 
 0.995
ENSCHAP00000028233
UTP6 small subunit processome component.
   
 
 0.994
nol10
Nucleolar protein 10.
   
 
 0.994
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.