SPATA16 protein (Clupea harengus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

SPATA16

Spermatogenesis associated 16. (568 aa)

Predicted Functional Partners:

ENSCHAP00000049804

0.549

ENSCHAP00000058599

0.528

ENSCHAP00000055169

0.527

rtf2

0.527

ENSCHAP00000061409

0.515

gopc

0.461

mea1

0.445

ENSCHAP00000035944

0.445

ENSCHAP00000019425

0.433

ENSCHAP00000021344

0.432

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000019425	ENSCHAP00000035944	ENSCHAP00000019425	ENSCHAP00000035944	Tektin 4.	Protein interacting with prkca 1.	0.564
ENSCHAP00000019425	ENSCHAP00000049804	ENSCHAP00000019425	ENSCHAP00000049804	Tektin 4.	annotation not available	0.529
ENSCHAP00000019425	ENSCHAP00000058599	ENSCHAP00000019425	ENSCHAP00000058599	Tektin 4.	annotation not available	0.585
ENSCHAP00000019425	SPATA16	ENSCHAP00000019425	ENSCHAP00000017146	Tektin 4.	Spermatogenesis associated 16.	0.433
ENSCHAP00000021344	ENSCHAP00000035944	ENSCHAP00000021344	ENSCHAP00000035944	annotation not available	Protein interacting with prkca 1.	0.416
ENSCHAP00000021344	ENSCHAP00000049804	ENSCHAP00000021344	ENSCHAP00000049804	annotation not available	annotation not available	0.459
ENSCHAP00000021344	SPATA16	ENSCHAP00000021344	ENSCHAP00000017146	annotation not available	Spermatogenesis associated 16.	0.432
ENSCHAP00000035944	ENSCHAP00000019425	ENSCHAP00000035944	ENSCHAP00000019425	Protein interacting with prkca 1.	Tektin 4.	0.564
ENSCHAP00000035944	ENSCHAP00000021344	ENSCHAP00000035944	ENSCHAP00000021344	Protein interacting with prkca 1.	annotation not available	0.416
ENSCHAP00000035944	ENSCHAP00000049804	ENSCHAP00000035944	ENSCHAP00000049804	Protein interacting with prkca 1.	annotation not available	0.565
ENSCHAP00000035944	ENSCHAP00000061409	ENSCHAP00000035944	ENSCHAP00000061409	Protein interacting with prkca 1.	Golgin A3.	0.526
ENSCHAP00000035944	SPATA16	ENSCHAP00000035944	ENSCHAP00000017146	Protein interacting with prkca 1.	Spermatogenesis associated 16.	0.445
ENSCHAP00000035944	gopc	ENSCHAP00000035944	ENSCHAP00000033987	Protein interacting with prkca 1.	Golgi associated PDZ and coiled-coil motif containing.	0.713
ENSCHAP00000049804	ENSCHAP00000019425	ENSCHAP00000049804	ENSCHAP00000019425	annotation not available	Tektin 4.	0.529
ENSCHAP00000049804	ENSCHAP00000021344	ENSCHAP00000049804	ENSCHAP00000021344	annotation not available	annotation not available	0.459
ENSCHAP00000049804	ENSCHAP00000035944	ENSCHAP00000049804	ENSCHAP00000035944	annotation not available	Protein interacting with prkca 1.	0.565
ENSCHAP00000049804	SPATA16	ENSCHAP00000049804	ENSCHAP00000017146	annotation not available	Spermatogenesis associated 16.	0.549
ENSCHAP00000049804	gopc	ENSCHAP00000049804	ENSCHAP00000033987	annotation not available	Golgi associated PDZ and coiled-coil motif containing.	0.461
ENSCHAP00000055169	SPATA16	ENSCHAP00000055169	ENSCHAP00000017146	Spermatogenesis associated 18.	Spermatogenesis associated 16.	0.527
ENSCHAP00000058599	ENSCHAP00000019425	ENSCHAP00000058599	ENSCHAP00000019425	annotation not available	Tektin 4.	0.585