STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105898575Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like. (146 aa)    
Predicted Functional Partners:
LOC105901427
Retinal guanylyl cyclase 2-like.
   
 
  0.859
ENSCHAP00000059194
Natriuretic peptide receptor 2.
   
 
  0.851
ENSCHAP00000014230
Guanylate cyclase 2g.
   
 
  0.850
ENSCHAP00000020641
Hypoxanthine phosphoribosyltransferase 1.
   
 
  0.849
ENSCHAP00000033262
Guanylate cyclase 2D, retinal.
   
 
  0.843
ENSCHAP00000041338
annotation not available
   
 
  0.843
ENSCHAP00000024493
annotation not available
   
 
  0.835
ENSCHAP00000059466
Guanylyl cyclase 2.
   
 
  0.835
ENSCHAP00000007175
Natriuretic peptide receptor 1a.
   
 
  0.826
npr1
Natriuretic peptide receptor 1.
   
 
  0.826
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.