STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmt9Protein arginine methyltransferase 9. (912 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
    
 0.908
prmt5
Protein arginine methyltransferase 5.
   
 0.866
fbl
Fibrillarin.
   
 
 0.841
tsr1
TSR1 ribosome maturation factor.
   
  0.809
bysl
Bystin like.
   
 0.800
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.797
ENSCHAP00000017756
Ribosomal RNA processing 12 homolog.
   
   0.793
nhp2
NHP2 ribonucleoprotein.
   
 0.780
trmt11
tRNA methyltransferase 11 homolog.
   
 0.763
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.748
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.