STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000017811Unc-51 like kinase 3. (497 aa)    
Predicted Functional Partners:
ENSCHAP00000006066
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 0.951
becn1
Beclin 1.
    
 0.941
ENSCHAP00000017699
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 0.939
atg13
Autophagy related 13.
   
 0.936
ENSCHAP00000020308
RB1-inducible coiled-coil 1.
    
 0.930
ENSCHAP00000042451
IST1 factor associated with ESCRT-III.
    
 
 0.918
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
    
 0.912
ENSCHAP00000039226
Autophagy related 9B.
   
 0.901
ENSCHAP00000052550
ATG9 autophagy related 9 homolog A (S. cerevisiae).
   
 0.901
atg101
Autophagy related 101.
    
 0.897
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.