STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000017826ECSIT signaling integrator. (454 aa)    
Predicted Functional Partners:
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 0.998
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 0.991
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 0.990
ENSCHAP00000047091
NADH:ubiquinone oxidoreductase complex assembly factor.
   
 0.990
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.989
ENSCHAP00000002718
NADH:ubiquinone oxidoreductase core subunit S3.
   
 0.987
ENSCHAP00000028262
NADH:ubiquinone oxidoreductase subunit B11.
   
 0.986
tmem70
Transmembrane protein 70.
    
 
 0.970
ndufs1
NADH:ubiquinone oxidoreductase core subunit S1.
    
 0.967
NDUFS1
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like.
    
 0.967
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.