STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018051TSC complex subunit 2. (1741 aa)    
Predicted Functional Partners:
ENSCHAP00000053849
TBC1 domain family, member 7.
    
 0.999
LOC105901881
GTP-binding protein Rheb-like.
    
 0.992
ENSCHAP00000029858
TSC complex subunit 1a.
   
 0.985
ENSCHAP00000030214
annotation not available
   
 0.985
ENSCHAP00000057215
TSC complex subunit 1b.
   
 0.985
ENSCHAP00000013204
Crystallin, beta B3.
    
 0.984
ENSCHAP00000040448
Crystallin, gamma N2.
    
 0.984
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
    
 0.951
ENSCHAP00000002550
TNF receptor-associated protein 1.
   
 0.945
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.945
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.