STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018059Myotubularin related protein 11. (842 aa)    
Predicted Functional Partners:
ENSCHAP00000006066
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 0.664
ENSCHAP00000048910
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.643
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.625
sacm1l
SAC1 like phosphatidylinositide phosphatase.
     
 0.585
pcsk9
Proprotein convertase subtilisin/kexin type 9.
     
 0.585
ENSCHAP00000030477
Divergent protein kinase domain 2Aa.
   
 
 0.553
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.553
dipk2a
Divergent protein kinase domain 2A.
   
 
 0.553
ENSCHAP00000047682
Myotubularin related protein 1a.
    
0.552
ENSCHAP00000035778
Myotubularin related protein 1b.
    
0.549
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.