STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex2Peroxisomal biogenesis factor 2. (313 aa)    
Predicted Functional Partners:
pex12
Peroxisomal biogenesis factor 12.
   
 0.993
ENSCHAP00000004539
Peroxisomal biogenesis factor 10.
   
 0.992
ENSCHAP00000042236
Peroxisomal biogenesis factor 14.
    
 0.992
LOC105895092
Non-specific lipid-transfer protein-like.
     
 0.989
ENSCHAP00000051341
Sterol carrier protein 2a.
     
 0.989
pex13
Peroxisomal biogenesis factor 13.
    
 0.988
pex19
Peroxisomal biogenesis factor 19.
   
 0.986
ENSCHAP00000008049
enoyl-CoA delta isomerase 2.
     
 0.984
ephx2
Epoxide hydrolase 2.
   
 
  0.981
ENSCHAP00000011890
Family with sequence similarity 185 member A.
    
 0.972
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.