STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018417Guided entry of tail-anchored proteins factor 3, ATPase. (341 aa)    
Predicted Functional Partners:
GET1
Guided entry of tail-anchored proteins factor 1.
    
 0.999
camlg
Calcium modulating ligand.
    
 0.997
ENSCHAP00000034061
annotation not available
    
 0.995
ENSCHAP00000033630
Acid phosphatase 1.
    
 0.946
ENSCHAP00000004410
RAD23 homolog A, nucleotide excision repair protein b.
   
 0.929
ENSCHAP00000018159
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.929
ENSCHAP00000018170
annotation not available
   
 0.929
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.929
ENSCHAP00000019940
Oculocutaneous albinism II.
    
 0.925
ENSCHAP00000012689
Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha.
   
 0.921
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.