STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018450annotation not available (2589 aa)    
Predicted Functional Partners:
ENSCHAP00000010301
Integrin, beta 1b.
    
 0.764
itgb5
Integrin subunit beta 5.
    
 0.684
ENSCHAP00000004709
annotation not available
    
 0.663
ENSCHAP00000046214
Integrin, alpha 3b.
    
 0.656
ENSCHAP00000049743
Integrin, alpha 11a.
     
0.654
ENSCHAP00000009954
Integrin alpha 4.
    
 0.646
ENSCHAP00000023060
Integrin, beta 4.
   
 0.636
itgb6
Integrin subunit beta 6.
    
 0.635
itgb8
Integrin subunit beta 8.
    
 0.626
ENSCHAP00000042663
Integrin, alpha 2b.
    
 0.616
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.