ENSCHAP00000018474 protein (Clupea harengus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000018474

annotation not available (92 aa)

Predicted Functional Partners:

ENSCHAP00000024171

0.498

ENSCHAP00000009934

0.473

ENSCHAP00000024760

0.469

ENSCHAP00000062737

0.467

ENSCHAP00000018942

0.466

ENSCHAP00000039807

0.457

ENSCHAP00000013995

0.454

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSCHAP00000009934	ENSCHAP00000018474	annotation not available	annotation not available	0.473
ENSCHAP00000009934	ENSCHAP00000024171	annotation not available	annotation not available	0.494
ENSCHAP00000013995	ENSCHAP00000018474	annotation not available	annotation not available	0.454
ENSCHAP00000013995	ENSCHAP00000024171	annotation not available	annotation not available	0.482
ENSCHAP00000018474	ENSCHAP00000009934	annotation not available	annotation not available	0.473
ENSCHAP00000018474	ENSCHAP00000013995	annotation not available	annotation not available	0.454
ENSCHAP00000018474	ENSCHAP00000018942	annotation not available	annotation not available	0.466
ENSCHAP00000018474	ENSCHAP00000024171	annotation not available	annotation not available	0.498
ENSCHAP00000018474	ENSCHAP00000024760	annotation not available	annotation not available	0.469
ENSCHAP00000018474	ENSCHAP00000039807	annotation not available	annotation not available	0.457
ENSCHAP00000018474	ENSCHAP00000062737	annotation not available	annotation not available	0.467
ENSCHAP00000018942	ENSCHAP00000018474	annotation not available	annotation not available	0.466
ENSCHAP00000018942	ENSCHAP00000024171	annotation not available	annotation not available	0.499
ENSCHAP00000024171	ENSCHAP00000009934	annotation not available	annotation not available	0.494
ENSCHAP00000024171	ENSCHAP00000013995	annotation not available	annotation not available	0.482
ENSCHAP00000024171	ENSCHAP00000018474	annotation not available	annotation not available	0.498
ENSCHAP00000024171	ENSCHAP00000018942	annotation not available	annotation not available	0.499
ENSCHAP00000024171	ENSCHAP00000024760	annotation not available	annotation not available	0.499
ENSCHAP00000024171	ENSCHAP00000039807	annotation not available	annotation not available	0.498
ENSCHAP00000024171	ENSCHAP00000062737	annotation not available	annotation not available	0.494