STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018573Poly (ADP-ribose) polymerase family, member 3. (523 aa)    
Predicted Functional Partners:
ENSCHAP00000001146
Caspase 9, apoptosis-related cysteine peptidase.
    
 0.914
casp3
Caspase 3.
    
 0.914
casp7
Caspase 7.
    
 0.914
LOC105911205
Caspase-7-like.
    
 0.914
ENSCHAP00000017150
Poly (ADP-ribose) polymerase 1.
  
 
0.910
LOC105903524
Chromosome unknown open reading frame, human C4orf27.
    
 
 0.909
ENSCHAP00000058293
X-ray repair complementing defective repair in Chinese hamster cells 5.
   
 
 0.905
ENSCHAP00000045782
annotation not available
    
 0.900
ENSCHAP00000016928
Poly (ADP-ribose) glycohydrolase a.
    
 0.898
ENSCHAP00000021930
Poly (ADP-ribose) glycohydrolase, like.
    
 0.898
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.