STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000018811annotation not available (224 aa)    
Predicted Functional Partners:
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.829
ENSCHAP00000004468
Cullin 2.
    
 0.828
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.731
galm
Galactose mutarotase.
  
 
 0.721
gale
UDP-galactose-4-epimerase.
    
 0.714
ENSCHAP00000035990
E4F transcription factor 1.
   
    0.708
ENSCHAP00000020479
annotation not available
    
 0.707
ENSCHAP00000028066
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.707
ENSCHAP00000027480
Glucuronidase, beta.
    
 0.687
ENSCHAP00000043204
Glucose-6-phosphate isomerase b.
     
 0.680
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.