STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP9AATPase phospholipid transporting 9A (putative). (1077 aa)    
Predicted Functional Partners:
ENSCHAP00000049610
annotation not available
     
 0.945
ENSCHAP00000058691
NME/NM23 family member 8.
     
 0.945
dnai2
Dynein axonemal intermediate chain 2.
   
 
 0.855
ENSCHAP00000060746
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 
 0.849
ENSCHAP00000022969
annotation not available
   
 
 0.840
ENSCHAP00000039171
Coiled-coil domain containing 65.
   
 
 0.835
WDR63
WD repeat domain 63.
   
 
 0.784
ENSCHAP00000015252
WD repeat domain 78.
   
 
 0.784
ENSCHAP00000044613
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.666
ENSCHAP00000031615
Dynein, light chain, roadblock-type 1.
     
 0.619
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.